Insertion junction: CLIP2.065446_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065446
Chromosome:chromosome 3
Location:664713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145667 (1 of 1) PTHR13060//PTHR13060:SF0 - SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2 // PROTEIN SGT1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCTATAAAAGCAAATTACAACCTCAAACGAGCTAATTAGTGGTCCTGA
Internal bar code:CAGAAGAACTGGGGCAATATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:822
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTCAGACTGATGCCTAG
Suggested primer 2:TCTCAAACAGGTCCATGGCC