Insertion junction: CLIP2.065453_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065453
Chromosome:chromosome 10
Location:6377910
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g464200 (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain 5'UTR
Cre10.g464250 (1 of 8) PF10184 - Uncharacterized conserved protein (DUF2358) (DUF2358) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAGTGTAGATAAATGTTGCGTTGCTGTATTTTTTCATGTGCACGCTC
Internal bar code:CATCGACGGTTGAGCGAGAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2297
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGAAGCAGCTGCAAGG
Suggested primer 2:TGGGAATGGGAGGCAGGATA