Insertion junction: CLIP2.065457_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065457
Chromosome:chromosome 12
Location:7251113
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g558800 (1 of 2) IPR000104//IPR017923 - Antifreeze protein, type I // Transcription factor IIS, N-terminal 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTAAAGCCCCGCGGCGCTGTCTTCACTGCAGACGCCCGTCGCAAGCG
Internal bar code:AGCATGCAAATGCCGTAAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:344
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AACATGACTAGGAGGCTGCG
Suggested primer 2:ACATGTGGTCAATGCGGACT