Insertion junction: CLIP2.065462_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065462
Chromosome:chromosome 7
Location:1427901
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g323400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGACTTGACTGTTGCGGCACTCATGCAACTGGCCATCCGGTGTGCGGC
Internal bar code:GAGCAGTTACATTAATATGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1175
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:ACACTCCTGCACACTGGATG
Suggested primer 2:AGACCCTTCCCTCTACCGTC