Insertion junction: CLIP2.065469_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065469
Chromosome:chromosome 17
Location:1333114
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705650 3'UTR
Cre17.g705700 PROB1,GGK1 Glutamate 5-kinase; (1 of 3) 2.7.2.11 - Glutamate 5-kinase / Gamma-glutamyl kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCCGGGGGTGGCTGCCCTAGCTACTGGCCGCCACTGGCACCGCCGCA
Internal bar code:ACCCGGTGTCTAGAGGGAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2598
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGGGGAAATCTGGTGCTG
Suggested primer 2:TGTCCCTCAAAACCGTACGG