Insertion junction: CLIP2.065474_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065474
Chromosome:chromosome 9
Location:4310553
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g801053 (1 of 30) PF00078//PF03372 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_1) // Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGGGCTGC
Internal bar code:GGTTTAACATGAGATTCGATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:42
LEAP-Seq percent confirming:1.02041
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:97
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCCAGGAAGATGTGCGT
Suggested primer 2:TCTGCCCTGCAAGCTAAGAC