Insertion junction: CLIP2.065477_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065477
Chromosome:chromosome 4
Location:2774485
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g223700 (1 of 2) K07735 - putative transcriptional regulator (algH) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGGGACGCTGTTCTGTTAGCTGGTCGGCGGTGCCAGTCTTTTGAGG
Internal bar code:CTTTGAGGAACCTAATTGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:249
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TATCTGGGGGTGATGGGAGG
Suggested primer 2:AGCCAGAGTAAAAGCGTGCT