Insertion junction: CLIP2.065482_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065482
Chromosome:chromosome 17
Location:2649194
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716800 XUV7 Xanthine/uracil/vitamin C permease-like, sodium-dependent 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCAGTCAGGATGGATGATACCCAGGATCAGCATGAGGATGAGGACCA
Internal bar code:AAGAGGCTTGAGTAGAATTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1651
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TCCACTGTGCTCACGATCAC
Suggested primer 2:TCCGAGCCTACGACGACTAT