Insertion junction: CLIP2.065495_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065495
Chromosome:chromosome 3
Location:8626144
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210177 (1 of 3) PF13405//PF13499 - EF-hand domain (EF-hand_6) // EF-hand domain pair (EF-hand_7) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTCTGGTCACCACTGGCCATCGCGTCCATCATAGTCGCGGGAATCA
Internal bar code:GATTGCTTACATTCTTGAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4154
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GATCGTGTGCACCACCTGTA
Suggested primer 2:GCGAAATCCCCCTTCTTCCA