Insertion junction: CLIP2.065502_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065502
Chromosome:chromosome 6
Location:3698744
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278153 (1 of 40) 3.4.24.38 - Gametolysin / Lysin 3'UTR
Cre06.g278154 (1 of 1) PTHR31560:SF0 - UPF0652 PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCTATCGACGAAGGGCGGATGCCACACCCACCACACACGAATGCATGA
Internal bar code:TAAACGTCTGGGGGGACAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1656
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATCAGTAATCGGAGGCAGCG
Suggested primer 2:CTGTGTTGCAGTGCTGTGTC