Insertion junction: CLIP2.065515_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065515
Chromosome:chromosome 4
Location:3017957
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g225050 (1 of 3) PF16166 - Chloroplast import apparatus Tic20-like (TIC20) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTGGCTGAAGAGGGCTGGGAGGGGGGAGGCGTGCGCTGGCGGGGTTG
Internal bar code:TGCTCACCAGTAGGTGGTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2237
LEAP-Seq percent confirming:49.2308
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAAGCTTCGCGTTGTGTG
Suggested primer 2:GGGGGAAATGGGTGTGTAGG