Insertion junction: CLIP2.065517_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065517
Chromosome:chromosome 16
Location:7865538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689535 (1 of 19) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTCGTGCGCTCAATCCTACCCCACCCCATCAGAATCAACATCATCCAA
Internal bar code:CGGCCCATGGCGTCAACGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATGACTACGGAGGAGCT
Suggested primer 2:CGCAAACACATGCACACGTA