Insertion junction: CLIP2.065518_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065518
Chromosome:chromosome 12
Location:5588858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531100 PBA2 20S proteasome beta subunit A2; (1 of 2) K02738 - 20S proteasome subunit beta 1 (PSMB6) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACGCTTTCGTGTGACGCCGCCTCAACCCGTTGCGTACTCCAGCTCCAC
Internal bar code:TGTATCGCCCCGTCCAAGACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1578
LEAP-Seq percent confirming:97.3684
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCAGGGTATGAACAACGG
Suggested primer 2:GTCAGTGGTGTCTGCGTGTA