Insertion junction: CLIP2.065528_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065528
Chromosome:chromosome 2
Location:570659
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076987 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGGGCGTCTGCAGACACACTCACACCGGTCAATACCTTCATTTTATT
Internal bar code:TGTCTGGATGGAGGCGGCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3515
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTCACACCCACACCCATACC
Suggested primer 2:GTGCACTGGTGTTTGAGCTG