Insertion junction: CLIP2.065529_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065529
Chromosome:chromosome 11
Location:3591439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478050 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAATCTCCGTGCTTGACGCTACCATTCCATACGCAGCAGGGATCAAGAC
Internal bar code:GTGACGGATTGGCTAAGCGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:861
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTAAAACGAGTGTGGGGG
Suggested primer 2:GCGCACTACTTACACAAGCG