Insertion junction: CLIP2.065529_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065529
Chromosome:chromosome 11
Location:3591439
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g478050 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCTACAGTCGCAGCCGTGCAGAGCCTGTACATACGATTTTGCGGAAGA
Internal bar code:CGTGAGGGAGGGTAAGCCCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACTACTTACACAAGCG
Suggested primer 2:AGCTAAAACGAGTGTGGGGG