Insertion junction: CLIP2.065540_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065540
Chromosome:chromosome 10
Location:6744121
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g467000 IFT55,IFT57 (1 of 1) K04638 - estrogen-related receptor beta like 1 (ESRRBL1, HIPPI); Intraflagellar Transport Protein 57 5'UTR
Cre10.g467050 MOT48,DAP2,IDA10,DNAA14 (1 of 3) PF08190 - pre-RNA processing PIH1/Nop17 (PIH1); Inner Arm Dynein assembly factor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTAGCAAAGCGGGTGCATTTCGGCTTGCTCAATTGTGTAGTTATGTAGC
Internal bar code:GGTTTATAACTGACGGTAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3334
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTCAGTTGGTGCCTCTG
Suggested primer 2:TGTTTGTATCTGCGGGGCAT