Insertion junction: CLIP2.065541_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065541
Chromosome:chromosome 6
Location:2598844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g269865 SMM18 (1 of 1) IPR000104//IPR029044 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferases; S-adenosyl-L-methionine-dependent methyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGGTGTACCTCTGCTCTGCAGAGGGCGGGGGGCGCAGCGTGCGTGCGT
Internal bar code:GTGAGGCAAGATTTTATCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1164
LEAP-Seq percent confirming:51.3514
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCATCCACACAAGTCGTT
Suggested primer 2:TGGGATGCGTGCTGTTTAGT