Insertion junction: CLIP2.065546_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065546
Chromosome:chromosome 8
Location:2396481
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g371800 (1 of 32) IPR006502 - Protein of unknown function PDDEXK-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTCCGCACGTCTGCCACAGTAGCATCAATCCGTACATCTGCCTCATTA
Internal bar code:CCCGCGTGAGTTGCCATAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:565
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGGGCCTCGATTGGAGT
Suggested primer 2:GGAAGAGGAGAGGCCACCTA