Insertion junction: CLIP2.065559_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065559
Chromosome:chromosome 6
Location:7016364
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297150 RWP9 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGATTCGATTTTCTCTCGTGCGGCTCCGCGCTTGGACTCACAGCAGCC
Internal bar code:GTGTTTTCAACGCCTGGGGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2013
LEAP-Seq percent confirming:77.0115
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGGGGGCTTAACCAAG
Suggested primer 2:GCAAGCAGGAGATGGGACTT