Insertion junction: CLIP2.065563_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065563
Chromosome:chromosome 15
Location:5756448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801857 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGATCGAGGAACAAAGTGCACCCAGCCCAGGCATTGACGAATCATGGA
Internal bar code:GTAGCGAGTGACCCTGGACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:170
LEAP-Seq percent confirming:39.1304
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTATCGACCTAAGGCCAC
Suggested primer 2:GACACACGAACACACAGCAC