Insertion junction: CLIP2.065587_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065587
Chromosome:chromosome 1
Location:5693681
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800099 (1 of 1) IPR002048//IPR010308 - EF-hand domain // TRP-like family 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGCAACGCCTACTGCCTCAACGGCGTGGACACGTCGTCATCCTCCA
Internal bar code:GCCTCTCGCGGCGACACAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1475
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCGGACCTGTGACTATC
Suggested primer 2:GTGCATCGGAAGCGGAATTC