Insertion junction: CLIP2.065590_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065590
Chromosome:chromosome 13
Location:3251996
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801550 (1 of 1) K11793 - cereblon (CRBN) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACGTGCTGTCGTCGTTTCGTGTCAGAGGTTCCGTGTTGTGTCTTTGT
Internal bar code:AGTATATTTCTCACCTTTCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1205
LEAP-Seq percent confirming:52.6316
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCAATGGGGAGGAAGT
Suggested primer 2:GCGTGGACTATGATGGGGAG