Insertion junction: CLIP2.065597_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065597
Chromosome:chromosome 13
Location:4999510
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606050 TSY1 Tyrosyl-tRNA synthetase; (1 of 1) PTHR11766//PTHR11766:SF0 - TYROSYL-TRNA SYNTHETASE // TYROSINE--TRNA LIGASE, MITOCHONDRIAL 3'UTR
Cre13.g606101 (1 of 2) PTHR19959//PTHR19959:SF147 - KINESIN LIGHT CHAIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACTTCAGGTGTGTACTTGACCAAATGTGGCGCATCTAGCGTATGCGCT
Internal bar code:ATGTATATCTGTTCACGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1188
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCCTACCCACTTTCCGC
Suggested primer 2:GAGGGGACACAGAGTTCAGC