Insertion junction: CLIP2.065597_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065597
Chromosome:chromosome 13
Location:4999515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g606050 TSY1 Tyrosyl-tRNA synthetase; (1 of 1) PTHR11766//PTHR11766:SF0 - TYROSYL-TRNA SYNTHETASE // TYROSINE--TRNA LIGASE, MITOCHONDRIAL 3'UTR
Cre13.g606101 (1 of 2) PTHR19959//PTHR19959:SF147 - KINESIN LIGHT CHAIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCTTACACAGCGCCACACGCTCAAGGCGCGCGAGGGGCTGGGGCCAC
Internal bar code:ATGTATATCTGTTCACGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2318
LEAP-Seq percent confirming:90.4762
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGGGACACAGAGTTCAGC
Suggested primer 2:TTTCCCTACCCACTTTCCGC