Insertion junction: CLIP2.065598_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065598
Chromosome:chromosome 6
Location:8858769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g311550 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAATAACCAGTGAATAACTTACTCAGTCGGCCCCGACGTGCCCGTCTGGC
Internal bar code:TCTACTTGTTGCATTAACAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2144
LEAP-Seq percent confirming:71.7949
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGTCTGCGGGGTCTTAC
Suggested primer 2:TGCAGTCAGAGAGTTGCAGG