Insertion junction: CLIP2.065616_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065616
Chromosome:chromosome 9
Location:781477
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g404050 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGCGCCCCCACTACCCGCCACCATCGCCACCATTAGTGCCGTCAACT
Internal bar code:CTGCGGGATGTGAGGAAGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1120
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCATACCCGTCATTGCAA
Suggested primer 2:AGTCTGTGTGGTGCTATCGC