Insertion junction: CLIP2.065619_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065619
Chromosome:chromosome 6
Location:5530068
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286750 (1 of 2) PF15247 - Histone RNA hairpin-binding protein RNA-binding domain (SLBP_RNA_bind) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAAAGCGCCCGGGAAGTATGCTTTGGGCCGTAATTTGCCTAATTATG
Internal bar code:TGTTCGTCGAATCTTTAGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2020
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTTGCCAGACAGCACAA
Suggested primer 2:TTGCCGAAGTCGATCTGCTT