Insertion junction: CLIP2.065624_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065624
Chromosome:chromosome 2
Location:3403043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g098550 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTGCCGACCAATATCTGGCCGTTGTACACGGGTTTTGAGGTGGCTGG
Internal bar code:GTCTTCCATCTCATATTGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1165
LEAP-Seq percent confirming:95.5224
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCTGCAATCGTTCATCG
Suggested primer 2:CTTGTCACCAAGTTGCAGCC