Insertion junction: CLIP2.065628_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065628
Chromosome:chromosome 10
Location:2409246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGCGTGCACCGTGCAGTGTGCAGTATGCAGCGTGCACCGTGCAGTGTG
Internal bar code:GGTGTACGATGGCTCACCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3468
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTTCCTCCAGCGTGACC
Suggested primer 2:CTGAAATGGCCGTATGCGTG