Insertion junction: CLIP2.065630_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065630
Chromosome:chromosome 3
Location:6602014
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194700 AGL1 (1 of 1) 3.2.1.20//3.2.1.3 - Alpha-glucosidase / Maltase-glucoamylase // Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase; Alpha glucosidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAATGCTGTTGCGCTCTCCTCAGGTGCCTCCTGCAGGGGTCCCAACA
Internal bar code:AGTCTCACGCCGAACGGTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1865
LEAP-Seq percent confirming:89.4737
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGGTGGGGATATGCCTGA
Suggested primer 2:GCGTAGTTTCACAGACCCCA