Insertion junction: CLIP2.065630_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065630
Chromosome:chromosome 3
Location:6602020
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g194700 AGL1 (1 of 1) 3.2.1.20//3.2.1.3 - Alpha-glucosidase / Maltase-glucoamylase // Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase; Alpha glucosidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCAGCTCGCCGCCAGCCAACAGTTCAACTCGTCCCCGCCTCTGGCGCT
Internal bar code:CAACTCTTATGCGCGAGACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2217
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTAGTTTCACAGACCCCA
Suggested primer 2:TCTGGTGGGGATATGCCTGA