Insertion junction: CLIP2.065634_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.065634
Chromosome:chromosome 1
Location:2435012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g014050 (1 of 1) PF16543 - DRG Family Regulatory Proteins, Tma46 (DFRP_C) 3'UTR
Cre01.g014100 (1 of 1) PTHR14614//PTHR14614:SF29 - HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN // PROTEIN FAM86A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTAGATGCCGGTACCAGACGTGGGCTGGCGGCGGCGGCAGCGATATC
Internal bar code:GCCATCAACTATTTTTATAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3946
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTAAGCAATGTCGAGCG
Suggested primer 2:GTATTCAGCCCTGCCCTTGT