Insertion junction: CLIP2.065635_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065635
Chromosome:chromosome 6
Location:5361592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285100 3'UTR
Cre06.g285150 APx-R,APX2 Ascorbate peroxidase-related; (1 of 3) 1.11.1.11 - L-ascorbate peroxidase / Ascorbic acid peroxidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGTTGACATGTGAAATGGAATCTTCGAAAGACGGACACTGGTGCTCA
Internal bar code:GGTTTGGAGTAAGGCATCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2297
LEAP-Seq percent confirming:95.8904
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCACGGTAGACTGGCGG
Suggested primer 2:GACTACCTCGCTACGCTTCC