Insertion junction: CLIP2.065642_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065642
Chromosome:chromosome 8
Location:2122471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369650 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATAGGAAAGCCGTACAAAGGGAATTGGCAGCCTGAATGGGTCGTTTA
Internal bar code:TATGGGCAAAATGCGGCCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1205
LEAP-Seq percent confirming:85.1064
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:AACTTGCGCTTGTGCTCTTG
Suggested primer 2:AGGGACTGCTGGGTATGGAT