Insertion junction: CLIP2.065648_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065648
Chromosome:chromosome 3
Location:3898615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170650 (1 of 1) IPR001849//IPR011993 - Pleckstrin homology domain // Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 3'UTR
Cre03.g170700 (1 of 3) 3.2.1.39 - Glucan endo-1,3-beta-D-glucosidase / Laminarinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCAGGGCTCAACGCCTACCGCATGCTTGCCATGCATGTCATACACTT
Internal bar code:AGGCGGCCTATTGTATCGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:6437
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTCGACTGGGTTTTGC
Suggested primer 2:CGTGATGGATGGAGCCGTAA