Insertion junction: CLIP2.065652_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065652
Chromosome:chromosome 1
Location:4782883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033200 (1 of 3) IPR001510 - Zinc finger, PARP-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGATGTGCGAGGATGTTGGGAGTTAGCGTTGCGCCTTTGCCGTTGATG
Internal bar code:TTGGGCCTTGTGTCATTACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1970
LEAP-Seq percent confirming:93.8775
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCACTTGTGTACATACG
Suggested primer 2:AGGACGAGCAAGAGGAGGAT