Insertion junction: CLIP2.065659_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065659
Chromosome:chromosome 3
Location:563490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145267 (1 of 1) 3.5.4.3 - Guanine deaminase / Guanine aminase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCATGCTCGAGTCGAGTTGAGTCAAGCGCCAAACCCTGGTGTAACAG
Internal bar code:TCTTTGATTGGCGGGGCGTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1639
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AACAACTGACGCGAAAACGG
Suggested primer 2:CTTCCACAACCGTGCAACAG