Insertion junction: CLIP2.065666_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065666
Chromosome:chromosome 13
Location:1472156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801520 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCGCGGAGACCTAGCCGCGGCGCATAGACGTAGCCAGGTGATTGCAG
Internal bar code:AGGCATGTGATCGCTGCCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:4641
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:140
LEAP-Seq n unique pos:150

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGGCGCATGATGCTAAC
Suggested primer 2:TGCTGTGACAGGACATGGAC