Insertion junction: CLIP2.065675_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.065675
Chromosome:chromosome 14
Location:3951371
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g632860 (1 of 19) IPR000104//IPR000719//IPR001245//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGGGCCGTTGCTCGGATGCCCTTTGAAATGGTGCACACAACCCAGTCC
Internal bar code:GCTGATGAACTTATCGGACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:84
LEAP-Seq percent confirming:18.75
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCCTCGAGTCATCCTGC
Suggested primer 2:GAGGAATGGTGGTGGACAGG