Insertion junction: CLIP2.065677_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.065677
Chromosome:chromosome 13
Location:1357897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g571560 (1 of 1) PF09737 - De-etiolated protein 1 Det1 (Det1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCAAAAGCCCGTCACGAGCTCGGTAACTACCTCAGTGGCCATAGGTGT
Internal bar code:CTCCAGCTTACTCAATCAACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2088
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCTCCTGCTTTGGTTCGTCT
Suggested primer 2:CCGAAGGCTTTGAAACTGCC