Insertion junction: CLIP2.065692_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065692
Chromosome:chromosome 10
Location:1230083
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g426350 predicted protein; (1 of 2) 5.2.1.14 - Beta-carotene isomerase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAAACTGCACAACGCTGAAGCTTACCCCAGCCTTGCGCCACACTTCT
Internal bar code:TCGGTCCTGGCTTGGGAACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2005
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCATCGGAGTGCGCAAG
Suggested primer 2:ATGCCGCTGATAAAGAGGGG