Insertion junction: CLIP2.065695_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.065695
Chromosome:chromosome 4
Location:3586841
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g228550 (1 of 2) PTHR31140//PTHR31140:SF1 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAAAGCACACTTGGGTCTCAAGAGACACCACCACGTCTTCCCCAGCAC
Internal bar code:AGTCGTACAAGTTTATCCGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:161
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCGGGCGTGTAAATAAG
Suggested primer 2:GTGTCTTGTTGCTTGCTGGG