Insertion junction: CLIP2.065697_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065697
Chromosome:chromosome 2
Location:1265180
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082000 AGE1 DNA repair glycosylase; (1 of 1) K03575 - A/G-specific adenine glycosylase (mutY) 5'UTR
Cre02.g082050 (1 of 1) K13115 - coiled-coil domain-containing protein 130 (CCDC130) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAATAAATATAACTGCAGAAGAGGCGCACAGCACGCCTGGCGCACTG
Internal bar code:AGTGGGTGCTAGAGTAGTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1387
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATACCCTGGTCCAGCTT
Suggested primer 2:CTGAAAAAGGTTGGCCCACG