Insertion junction: CLIP2.065701_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065701
Chromosome:chromosome 6
Location:2663274
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g270450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACTGCTCGGCCCCGGTCACAAGAGGAGTCTTGGGTGCCGGCGCAAGT
Internal bar code:GCCTCCCATCGTAAGTATAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2136
LEAP-Seq percent confirming:98.9011
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTTCGCGCCTTATCAAC
Suggested primer 2:TTTACCCTGTGATGGACGGC