Insertion junction: CLIP2.065706_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.065706
Chromosome:chromosome 5
Location:2548333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239400 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCGTTCTTTGAGATATGTGTTGTAGCGTGCGTGGGAAAGCAGTAGCAC
Internal bar code:GCCTCAGCAACATGAACGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3050
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCTCGGCGAATTCTGCG
Suggested primer 2:ATTGGACACCAGGTGCGAAT