Insertion junction: CLIP2.065712_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.065712
Chromosome:chromosome 7
Location:2947212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332800 (1 of 1) K14544 - U3 small nucleolar RNA-associated protein 22 (UTP22, NOL6) 3'UTR
Cre07.g332851 SELM2,SELENOM,SELM (1 of 1) PTHR13077:SF7 - SELENOPROTEIN M; Selenoprotein M 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATCCCAGTCCACCGTCAGAATGTCTGTGTGGGCAACTCCTTAAGCTG
Internal bar code:GTTTGGATTATCTGCCTCAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1971
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCCTTTGTGTGCTGACC
Suggested primer 2:CGCCCCTTTCCAGTAGACTG