Insertion junction: CLIP2.065720_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065720
Chromosome:chromosome 10
Location:2409177
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g435100 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCTATGTAAGCATGGTGCACGTGCAGTTGCTATAAATGTGCAGCGTGC
Internal bar code:TTTGATAATTTTATCACTGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1039
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTTTCCTCCAGCGTGACC
Suggested primer 2:CTGAAATGGCCGTATGCGTG