Insertion junction: CLIP2.065732_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.065732
Chromosome:chromosome 1
Location:2403870
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g013769 5'UTR
Cre01.g013800 SXD1,TCY1 (1 of 1) PF14392 - Zinc knuckle (zf-CCHC_4); Zinc finger containing protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAATTTTGCTGCGCATCCACAGTAGGCACTGTGGAAGTTATGCATACCT
Internal bar code:CAAATCCCTAGAAAGGTATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2496
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAAGTGATGCGTGTTGGA
Suggested primer 2:CCTTGCAGCATTGGCCAAAT