Insertion junction: CLIP2.065734_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.065734
Chromosome:chromosome 6
Location:5994032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g290450 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGCAGAGGCTTGACAATCAGGAGCTTGAGGCTCTCGAGCAATTTGT
Internal bar code:GTACGCATGAGAGTAGGACTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2216
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGCATGCCTAACCCCAA
Suggested primer 2:GTGAGCCAAAAACAGCCCAG